Morphophonemics studies the interaction between morphological and phonological processes in language, focusing on how morphemes are altered in different phonetic contexts. It examines the rules governing sound changes that occur when morphemes combine, influencing pronunciation and meaning.
Phonological theory examines the way sounds function within a particular language or languages, focusing on the rules governing sound patterns and their systematic organization. The theory seeks to understand how phonetic elements interact with linguistic units like morphemes and how these interactions affect meaning and communication.